CDS

Accession Number TCMCG075C18447
gbkey CDS
Protein Id XP_017979213.1
Location join(257465..257671,257768..257827,257916..258083,258170..258236,258625..258893,258982..259077,259218..259251,259410..259495,259915..259956,260051..260128,260210..260266)
Gene LOC18595043
GeneID 18595043
Organism Theobroma cacao

Protein

Length 387aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA341501
db_source XM_018123724.1
Definition PREDICTED: RNA polymerase II subunit 5-mediating protein homolog isoform X2 [Theobroma cacao]

EGGNOG-MAPPER Annotation

COG_category O
Description RNA polymerase II subunit 5-mediating protein homolog
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01009        [VIEW IN KEGG]
KEGG_ko ko:K17560        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000428        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003682        [VIEW IN EMBL-EBI]
GO:0003712        [VIEW IN EMBL-EBI]
GO:0003714        [VIEW IN EMBL-EBI]
GO:0004857        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005665        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006357        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009615        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010563        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010921        [VIEW IN EMBL-EBI]
GO:0010923        [VIEW IN EMBL-EBI]
GO:0016591        [VIEW IN EMBL-EBI]
GO:0019208        [VIEW IN EMBL-EBI]
GO:0019212        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019220        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0030234        [VIEW IN EMBL-EBI]
GO:0030880        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0035303        [VIEW IN EMBL-EBI]
GO:0035305        [VIEW IN EMBL-EBI]
GO:0043086        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044092        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0045936        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050790        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051174        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051336        [VIEW IN EMBL-EBI]
GO:0051346        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0055029        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061695        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0098772        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGAAAAACAGAAGTGAAACGGACGGTGACGTCGCTATCGTCGATGTTCCCCACGGAGGAGGCGCAGAAGGCGGCGAAGCGGGTGGAGGAGACGCTTTTAGAGAAGCAGAATGAAATGAACCAATTGAGAGGCTTCATCGCCGATAACACCTCCCTCATTAACCTCGTTCAAAAGCTCCCCGACGAACTCCACCACGATATCATGGTTCCCTTTGGGAAAGCGGCGTTTCTTCCTGGTCGCTTGATCCACACGAACGAGTTTCTGGTTCTACTGGGAGAAAGTTACTATGCGGAAAGAACAGCTAAACAAGCTGCTGAAATTCTAAAGAGAAGAGGGAAGTCATTGGAGTCTAAAGTAGATTCGTTGAAGGCCGTCATGCAGGATCTTAAAGCTGAGGCTTCCTTTTTTGATTCCACTGCTTCTGAAGCAGCAGAGGGTCTTGTGGAGATTAGGGAAGAGTACGAGGATGAGAGTTCTACCCAGAGGGAATCTCAATCAGATCCACTGGAGCAAGATTCACCTAGTTTCACTGAAGCAGACAATATGGTGGGTGCATCTGAGAATGAAGAATATGCCCGTATAATGTCCAGGTTGGAAGAACTTGAGAAAGAAGAACTTGCAGCTGAAAGTTGTGGAGAGGATGATGAAGATCAGGATAACAATCCTGCTGAAAGTGACGGTGATGACAAGGAGCAAACTAAAGCTGTTTTTGACAGAAAAAAGAATAAAGGTTACAGTTCTCTTGATCATGATCAAAGATATTCAGAGTCAAGGAAACCGCTACAGCAGTCAAAAGGCAAAGATCCAATGAAAGAAGAGATGTCTAATAATTATCATCATCAAGATTTAATTAATCAGTTAGCTTGTACTGGATTGACGGTAGAACCTGTTACGAAAGGTAAAATGTCACATAGTGGGAATATGCGCCAAGACACAAAGATGTTAAATCCTTCCATTACTGCTTCTGCACCTTCTGAAAAAAAGAAATCTGTCCAGACCTCAAATTCAGGATTTGATGGTTCCAAGGCTTTTACAGGCTCCATAGTAGAGCATAATGAGAATATGGAGAAAAATTTGGCGGGTCAAAGTACAACTTCATCACAGCTTTCTGGTTCTCAACCGTGGAAGCCAGTGTCTAGATTCAAAATGCAAAGAAAGTAG
Protein:  
MGKTEVKRTVTSLSSMFPTEEAQKAAKRVEETLLEKQNEMNQLRGFIADNTSLINLVQKLPDELHHDIMVPFGKAAFLPGRLIHTNEFLVLLGESYYAERTAKQAAEILKRRGKSLESKVDSLKAVMQDLKAEASFFDSTASEAAEGLVEIREEYEDESSTQRESQSDPLEQDSPSFTEADNMVGASENEEYARIMSRLEELEKEELAAESCGEDDEDQDNNPAESDGDDKEQTKAVFDRKKNKGYSSLDHDQRYSESRKPLQQSKGKDPMKEEMSNNYHHQDLINQLACTGLTVEPVTKGKMSHSGNMRQDTKMLNPSITASAPSEKKKSVQTSNSGFDGSKAFTGSIVEHNENMEKNLAGQSTTSSQLSGSQPWKPVSRFKMQRK